BseRI
BseRI recognizes GAGGAG and cuts at a fixed distance downstream, leaving a 2-nucleotide overhang set by the flanking DNA.
Recognition & cut site
GAGGAG(10/8)
Properties
- Recognition site
- GAGGAG
- Cut site
- GAGGAG(10/8)
- Ends produced
- 3′ overhang
- Overhang
- variable (2 nt)
- Site length
- 6 bp
- Cuts on average
- 1 / 4,096 bp
- Palindromic
- No
- Cuts within site
- No (type IIS)
Sequence checker
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Related enzymes
Isoschizomers
same site, same cutNone known.
Neoschizomers
same site, different cut positionNone known.
Compatible ends
different site, matching overhangNone known.