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Star Republic: Guide for Biologists

Promoter sequences

Virtualab Protocols (Chang Bioscience)
Consensus sequence for prokaryotic promoters:

-35 box -10 box +1
-----
-----
TTGACA
AACTGT
-----------------
-----------------
TATAAT
ATATTA
-------
-------
transcribed sequences

Consensus sequence for eukaryotic promoters (Pol II):

-200-70
GC box
-200-70
CAAT box
-35-20
TATA box
initiator +1
---
---
GGGCGG
CCCGCC
---
---
CCAAT
GGTTA
-------------
-------------
TATAAA
ATATTT
-----
-----
PyPyA+1N(T/A)PyPy--
PuPuT  N(A/T)PuPu--